研究论文

基于GPU加速的磁共振血管造影图像的并行分割与追踪算法

  • 马超 ,
  • 张雪莹 ,
  • 王成龙 ,
  • 谢海滨 ,
  • 陆建平 ,
  • 杨光 ,
  • 张成秀
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  • 1. 华东师范大学 物理与材料科学学院, 上海市磁共振重点实验室, 上海 200062;
    2. 上海卡勒幅磁共振技术有限公司, 上海 201614;
    3. 上海市第二军医大学附属长海医院 放射科, 上海 200433
张雪莹(1990-),女,上海人,硕士研究生,无线电物理专业

收稿日期: 2016-04-01

  修回日期: 2016-11-01

  网络出版日期: 2016-12-05

基金资助

国家高技术研究发展计划资助项目(2014AA123400).

Parallel Segmentation and Tracking Algorithm for Magnetic Resonance Angiography Images Based on GPU

  • MA Chao ,
  • ZHANG Xue-ying ,
  • WANG Cheng-long ,
  • XIE Hai-bin ,
  • LU Jian-ping ,
  • YANG Guang ,
  • ZHANG Cheng-xiu
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  • 1. Shanghai Key Laboratory of Magnetic Resonance, School of Physics and Materials Science, East China Normal University, Shanghai 200062, China;
    2. Shanghai Colorful Magnetic Resonance Technology Corporation Limited, Shanghai 201614, China;
    3. Department of Radiology, Changhai Hospital, The Second Military Medical University, Shanghai 200433, China

Received date: 2016-04-01

  Revised date: 2016-11-01

  Online published: 2016-12-05

摘要

在应用磁共振血管造影图像进行临床诊断时,临床医生往往需要提取感兴趣区域(Region Of Interest,ROI)的部分血管.这个工作传统上需要手工进行,费时费力.该文提出一种并行的血管分割与追踪算法,利用现代图形处理器(Graphics Processing Unit,GPU)所具备的大规模并行计算能力进行快速的血管分割.首先将三维图像网格化为共面的立方体,并行处理每个立方体,确定立方体中哪些表面有血管通过,以及立方体中哪些体素包含血管.之后再将该结果用于串行的全局分割与血管追踪处理.实验结果表明,利用这种先并行后串行的方法,可以在1 s之内完成全脑血管的分割,分割的结果也更准确.

本文引用格式

马超 , 张雪莹 , 王成龙 , 谢海滨 , 陆建平 , 杨光 , 张成秀 . 基于GPU加速的磁共振血管造影图像的并行分割与追踪算法[J]. 波谱学杂志, 2016 , 33(4) : 570 -580 . DOI: 10.11938/cjmr20160406

Abstract

Clinical magnetic resonance angiography (MRA) often involves extraction of images, which is often done manually by radiologists. The process can be tedious and time-consuming. In this study, we propose a new parallel vessel segmentation/tracking algorithm, utilizing large-scale parallel computing provided by graphics processing unit (GPU). The whole three-dimensional image volumes are first divided into small cubes, which share surface with their neighbors. Each cube is then processed separately to determine whether there are vessels passing through its surface. These results are then used for global segmentation and vessel tracking. Application of the algorithm to real MRA data showed that segmentation of a whole-brain MRA dataset could be achieved in less than 1 s.

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