研究论文

基于非局部约束球面反卷积模型的纤维追踪算法

  • 岳晴 ,
  • 王远军
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  • 上海理工大学 医学影像工程研究所, 上海 200093

收稿日期: 2019-12-31

  网络出版日期: 2020-03-23

基金资助

国家自然科学基金资助项目(61201067);上海市自然科学基金资助项目(18ZR1426900).

A Fiber Tracking Algorithm Based on Non-Local Constrained Spherical Deconvolution

  • YUE Qing ,
  • WANG Yuan-jun
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  • Institute of Medical Imaging Engineering, University of Shanghai for Science and Technology, Shanghai 200093, China

Received date: 2019-12-31

  Online published: 2020-03-23

摘要

基于扩散磁共振成像的纤维追踪技术为非侵入性观测脑白质结构提供了有力的手段,约束球面反卷积作为一种多纤维追踪模型,能够对体素内纤维的方向信息进行建模,进而实现脑纤维的重构.针对约束球面反卷积模型的不适定性以及细节信息丢失问题,本文在约束球面反卷积的基础上,结合邻域信息和分数阶正则化,提出了一种基于非局部约束球面反卷积模型的确定型纤维追踪算法,分数阶的非局部特性使得纤维方向分布模型估计的误差更小,而邻域信息的引入保证了空间一致性,可以减少噪声的影响.分别利用模拟数据、人脑实际数据对本文算法及基于约束球面反卷积的确定型纤维追踪算法作对比实验,结果表明,利用本文算法追踪的纤维不仅整体视觉效果上较整洁,而且对交叉纤维的重建结果更完整准确.

本文引用格式

岳晴 , 王远军 . 基于非局部约束球面反卷积模型的纤维追踪算法[J]. 波谱学杂志, 2020 , 37(4) : 422 -433 . DOI: 10.11938/cjmr20192798

Abstract

Fiber tracking with diffusion magnetic resonance imaging provides a powerful tool for non-invasive observation of white matter in the brain. Constrained spherical deconvolution (CSD) is a multi-fiber tracking model, which can model the orientation of fibers in the voxel and achieve brain fiber reconstruction. This paper proposes a deterministic fiber tracking algorithm based on a non-local CSD model that combines neighborhood information and fractional regularization. The algorithm aimed to solve the ill-posed problem and loss detailed information in the conventional CSD model. The nonlocality of fractional order reduced the errors of fiber orientation distribution estimation, and the neighborhood information was used to ensure spatial consistency, reducing the effects of random noise. Simulation data and experimental human brain data were used to compare the performance of the proposed algorithm and the conventional CSD deterministic tracking algorithm. The results demonstrated that the proposed algorithm produced not only better overall visual effect, but also more complete and accurate reconstruction of the crossing fibers.

参考文献

[1] Essayed W I, Zhang F, Unadkat P, et al. White matter tractography for neurosurgical planning:A topography-based review of the current state of the art[J]. Neuroimage:Clinical, 2017, 15:659-672.
[2] Dell'Acqua F, Rizzo G, Scifo P, et al. A model-based deconvolution approach to solve fiber crossing in diffusion-weighted MR imaging[J]. IEEE Trans Biomed Eng, 2007, 54(3):462-472.
[3] JIANG F, WANG Y J. Construction of human brain templates with diffusion tensor imaging data:a review[J]. Chinese J Magn Reson, 2018, 35(4):520-530. 蒋帆, 王远军. 扩散张量成像的人脑模板构建[J]. 波谱学杂志, 2018, 35(4):520-530.
[4] Assemlal H E, Tschumperlé D, Brun L, et al. Recent advances in diffusion MRI modeling:Angular and radial reconstruction[J]. Med Image Anal, 2011, 15(4):369-396.
[5] Abhinav K, Yeh F C, Pathak S, et al. Advanced diffusion MRI fiber tracking in neurosurgical and neurodegenerative disorders and neuroanatomical studies:A review[J]. Biochim Biophys Acta, 2014, 1842(11):2286-2297.
[6] Vettel J M, Cooper N, Garcia J O, et al. White matter tractography and diffusion-weighted imaging[M]//eLS. John Wiley & Sons, Ltd, 2017.
[7] Toselli B, Franchin C, Scifo P, et al. Improved spherical deconvolution to solve fiber crossing in diffusion-weighted MR Imaging[C]. Annu Int Conf IEEE Eng Med Biol Soc, 2015, 2015:406-409.
[8] Dell'Acqua F, Tournier J D. Modelling white matter with spherical deconvolution:How and why?[J]. NMR Biomed, 2018:e3945.
[9] Canales-Rodríguez E J, LEGARRETA J H, PIZZOLATO M, et al. Sparse wars:A survey and comparative study of spherical deconvolution algorithms for diffusion MRI[J]. Neuroimage, 2019, 184:140-160.
[10] Roine T, Jeurissen B, Perrone D, et al. Informed constrained spherical deconvolution (iCSD)[J]. Med Image Anal, 2015, 24(1):269-281.
[11] Cacciola A, Milardi D, Calamuneri A, et al. Constrained spherical deconvolution tractography reveals Cerebello-Mammillary connections in humans[J]. Cerebellum, 2017, 16(2):483-495.
[12] Tournier J D, Fernando C, Alan C. Robust determination of the fiber orientation distribution in diffusion MRI:Non-negativity constrained super-resolved spherical deconvolution[J]. Neuroimage, 2007, 35(4):1459-1472.
[13] Hochstenbach M E, Reichel L. Fractional Tikhonov regularization for linear discrete ill-posed problems[J]. BIT, 2011, 51:197-215.
[14] LIU Y N, PENG R Y, WANG L. Super-resolution image reconstruction based on adaptive fractional order total variation regularization[J]. Computer and Modernization, 2018, 9:56-61. 刘亚男, 彭仁勇, 王琳. 基于自适应分数阶全变分的超分辨率图像重建[J]. 计算机与现代化, 2018, 9:56-61.
[15] CHEN Y, GUO B Y, MA X Y. Image processing based on regularization with fractional calculus[J]. Mathematica Numerica Sinica, 2017, 39(4):406. 陈云, 郭宝裕, 马祥园. 基于分数阶微积分正则化的图像处理[J]. 计算数学, 2017, 39(4):406.
[16] Ye C Y, Prince J L. Dictionary-based fiber orientation estimation with improved spatial consistency[J]. Med Image Anal, 2018, 44:41-53.
[17] Ye C Y, Zhuo J C, Gullapalli P R, et al. Estimation of fiber orientations using neighborhood information[M]//MICCAI Workshop. Computational diffusion MRI. Germany:Springer, 2015:87-96.
[18] Jeurissen B, Descoteaux M, Mori S, et al. Diffusion MRI fiber tractography of the brain[J]. NMR Biomed, 2019, 32(4):e3785.
[19] LU C, DONG J J, ZHONG K. Diffusion tensor imaging on TX mice brain at 9.4 T[J]. Chinese J Magn Reson, 2019, 36(4):510-516. 鲁晨, 董健健, 钟凯. 9.4 T下TX模型小鼠脑组织的扩散张量成像研究[J]. 波谱学杂志, 2019, 36(4):510-516.
[20] Tournier J D, CALAMANTE F, GADIAN D G, et al. Direct estimation of the fiber orientation density function from diffusion-weighted MRI data using spherical deconvolution[J]. Neuroimage, 2004, 23(3):1176-1185.
[21] Morigi S, Reichel L, Sgallari F. Fractional tikhonov regularization with a nonlinear penalty term[J]. J Comput Appl Math, 2017, 324:142-154.
[22] 张军. 基于邻域字典基模型的脑纤维流线微分方程跟踪算法[D]. 杭州:浙江工业大学, 2017.
[23] Schomburg H, Hohage T. Semi-local tractography strategies using neighborhood information[J]. Med Image Anal, 2017, 38:165-183.
[24] Cherifi D, Boudjada M, Morsli A, et al. Combining improved euler and Runge-Kutta 4th order for tractography in diffusion-weighted MRI[J]. Biomed Signal Proces, 2018, 41:90-99.
[25] Rathi Y, Neithammer M, Laun F, et al. Diffusion propagator estimation using radial basis functions[M]//MICCAI workshop. Computational Diffusion MRI and Brain Connectivity. Springer International Publishing, 2013:57-66.
[26] Ariel R, Yeatman J D, Franco P, et al. Evaluating the accuracy of diffusion MRI models in white matter[J]. PLos One, 2015, 10(4):e0123272.
[27] JIANG S, ZHANG P F, HAN T, et al. Tri-linear interpolation-based cerebral white matter fiber imaging[J]. Neural Regen Res, 2013, 8(23):2155-2164.
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