基于深度学习的扩散磁共振成像降噪方法研究进展
Research Progress on Diffusion Magnetic Resonance Imaging Noise Reduction Methods Based on Deep Learning
Received date: 2026-01-06
Online published: 2026-08-11
扩散磁共振成像(diffusion Magnetic Resonance Imaging,dMRI)是一种重要的脑微观结构成像技术,在脑白质纤维束组织成像中具有突出优势. 在扩散加权图像采集过程中,受信号衰减、长回波时间及系统噪声等因素影响,图像信噪比较低,进而对脑微结构扩散模型参数估计产生影响,因此,对信号的有效降噪可提升成像质量和定量分析的准确性. 本文首先介绍了dMRI的基本成像原理及其噪声统计特性;随后系统梳理了dMRI降噪方法的研究进展,并重点分析基于深度学习的降噪方法,结合降噪过程对微结构特性的保持来分析方法的优势和局限性;接着总结了常用的降噪评价指标并与经典降噪方法的性能特点进行了对比分析;最后总结了当前dMRI降噪研究所面临的关键挑战,展望了未来可能的发展方向.
马素超 , 王远军 . 基于深度学习的扩散磁共振成像降噪方法研究进展[J]. 波谱学杂志, 2026 , 43(3) : 367 -388 . DOI: 10.11938/cjmr20263197
Diffusion magnetic resonance imaging (dMRI) serves as an essential technique for imaging brain microstructure, exhibiting unique superiority in visualizing white matter fiber tracts. During the acquisition of diffusion-weighted images, multiple factors including signal attenuation, long echo time, and system noise lead to low signal-to-noise ratios (SNRs). This defect impairs the estimation of microstructure-related diffusion parameters, highlighting the importance of effective denoising for improving image quality and quantitative accuracy. This paper firstly introduces the fundamental imaging principles of dMRI and its noise statistical characteristics. Subsequently, it systematically reviews research progress in dMRI denoising methods, with a focus on deep learning-based approaches. The advantages and limitations of these methods are analyzed by evaluating their preservation of microstructural features during denoising. Common denoising evaluation metrics are summarized and compared with the performance of classical denoising methods. Finally, key challenges in current dMRI denoising research are summarized, and future directions are discussed.
| [1] | LUNDELL H, STEELE C J. Cerebellar imaging with diffusion magnetic resonance imaging: approaches, challenges, and potential[J]. Curr Opin Behav Sci, 2024, 56(1): 101353. |
| [2] | LIU X Y, WU Z K, WANG X C. An intrinsic anisotropic feature of DTI images derived by geometric properties on the Riemannian manifold[J]. Biomed Signal Proces, 2024, 87(1): 105478. |
| [3] | LIAO Y, COELHO S, CHEN J, et al. Mapping tissue microstructure of brain white matter in vivo in health and disease using diffusion MRI[J]. Imaging Neurosci, 2024, 2(1): 1-17. |
| [4] | LEBEL C, DEONI S. The development of brain white matter microstructure[J]. NeuroImage, 2018, 182(1): 207-218. |
| [5] | TAMNES C K, ROALF D R, GODDINGS A L, et al. Diffusion MRI of white matter microstructure development in childhood and adolescence: Methods, challenges and progress[J]. Dev Cogn Neurosci, 2018, 33(1): 161-175. |
| [6] | LEE H H, PAPAIOANNOU A, KIM S L, et al. A time-dependent diffusion MRI signature of axon caliber variations and beading[J]. Commun Biol, 2020, 3(1): 354-366. |
| [7] | LAVDAS I, BEHAN K C, PAPADAKI A, et al. A phantom for diffusion-weighted MRI (DW-MRI)[J]. J Magn Reson Imaging, 2013, 38(1): 173-179. |
| [8] | YANG L M, WANG Y J. New method for diffusion-weighted images denoising based on patch-matching with higher-order singular value decomposition[J]. J Xray Sci Technol, 2025, 33(3): 526-539. |
| [9] | DENG L, WANG Y J. DTI brain template construction based on gaussian averaging[J]. Chinese J Magn Reson, 2022, 39(4): 413-427. |
| 邓岚, 王远军. 基于高斯平均的DTI脑模板构建方法[J]. 波谱学杂志, 2022, 39(4): 413-427. | |
| [10] | GUNDOGDU B, PITTMAN J M, CHATTERJEE A, et al. Directional and inter-acquisition variability in diffusion-weighted imaging and editing for restricted diffusion[J]. Magn Reson Med, 2022, 88(5): 2298-2310. |
| [11] | ZHANG X, PENG J, XU M, et al. Denoise diffusion-weighted images using higher-order singular value decomposition[J]. NeuroImage, 2017, 156(1): 128-145. |
| [12] | MANJON J V, COUPE P, CONCHA L, et al. Diffusion weighted image denoising using overcomplete local PCA[J]. PloS ONE, 2013, 8(9): e73021. |
| [13] | CHENG H, VINCI-BOOHER S, WANG J, et al. Denoising diffusion weighted imaging data using convolutional neural networks[J]. PloS ONE, 2022, 17(9): e0274396. |
| [14] | YANG L M, WANG Y J. Research progress of denoising algorithms for diffusion tensor images[J]. Chinese J Magn Reson, 2024, 41(3): 341-361. |
| 杨黎明, 王远军. 扩散张量图像降噪算法研究进展[J]. 波谱学杂志, 2024, 41(3): 341-361. | |
| [15] | LE BIHAN D. Looking into the functional architecture of the brain with diffusion MRI[J]. Nat Rev Neurosci, 2003, 4(6): 469-480. |
| [16] | BUADES A, COLL B, MOREL J-M. A non-local algorithm for image denoising[C]// Proceedings of the 2005 IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR), San Diego, CA, USA. Piscataway: IEEE, 2005: 60-65. |
| [17] | MANJON J V, CARBONELL-CABALLERO J, LULL J J, et al. MRI denoising using non-local means[J]. Med Image Anal, 2008, 12(4): 514-523. |
| [18] | COUPE P, YGER P, PRIMA S, et al. An optimized blockwise nonlocal means denoising filter for 3-D magnetic resonance images[J]. IEEE T Med Imaging, 2008, 27(4): 425-441. |
| [19] | AJA-FERNANDEZ S, NIETHAMMER M, KUBICKI M, et al. Restoration of DWI data using a Rician LMMSE estimator[J]. IEEE T Med Imaging, 2008, 27(10): 1389-1403. |
| [20] | HENRIQUES R N. Advanced methods for diffusion MRI data analysis and their application to the healthy ageing brain[D]. Cambridge: University of Cambridge, 2017. |
| [21] | TRISTAN-VEGA A, AJA-FERNANDEZ S. DWI filtering using joint information for DTI and HARDI[J]. Med Image Anal, 2010, 14(2): 205-218. |
| [22] | VERAART J, FIEREMANS E, NOVIKOV D S. Diffusion MRI noise mapping using random matrix theory[J]. Magn Reson Med, 2016, 76(5): 1582-1593. |
| [23] | RAMOS-LLORDEN G, VEGAS-SANCHEZ-FERRERO G, LIAO C, et al. SNR-enhanced diffusion MRI with structure-preserving low-rank denoising in reproducing kernel Hilbert spaces[J]. Magn Reson Med, 2021, 86(3): 1614-1632. |
| [24] | MCGRAW T, VEMURI B, OZARSLAN E, et al. Variational denoising of diffusion weighted MRI[J]. Inverse Probl Imaging, 2009, 3(4): 625-648. |
| [25] | LAM F, BABACAN S D, HALDAR J P, et al. Denoising diffusion-weighted magnitude MR images using rank and edge constraints[J]. Magn Reson Med, 2014, 71(3): 1272-1284. |
| [26] | JUREK J, MATERKA A, LUDWISIAK K, et al. Supervised denoising of diffusion-weighted magnetic resonance images using a convolutional neural network and transfer learning[J]. Biocybern Biomed Eng, 2023, 43(1): 206-232. |
| [27] | KAYE E A, AHERNE E A, DUZGOL C, et al. Accelerating prostate diffusion-weighted MRI using a guided denoising convolutional neural network: retrospective feasibility study[J]. Radiol Artif Intell, 2020, 2(5): e200007. |
| [28] | PHIPPS K, BOOMEN M V D, EDER R, et al. Accelerated in vivo cardiac diffusion-tensor MRI using residual deep learning-based denoising in participants with obesity[J]. Radiol-Cardiothorac, 2021, 3(3): e200580. |
| [29] | PFAFF L, DARWISH O, WAGNER F, et al. Enhancing diffusion-weighted prostate MRI through self-supervised denoising and evaluation[J]. Sci Rep, 2024, 14(1): 24292. |
| [30] | RAN M, HU J R, CHEN Y, et al. Denoising of 3D magnetic resonance images using a residual encoder-decoder Wasserstein generative adversarial network[J]. Med Image Anal, 2019, 55(1): 165-180. |
| [31] | TIAN Q, BILGIC B, FAN Q, et al. DeepDTI: High-fidelity six-direction diffusion tensor imaging using deep learning[J]. NeuroImage, 2020, 219(1): 117017. |
| [32] | TIAN Q, LI Z, FAN Q, et al. SDnDTI: Self-supervised deep learning-based denoising for diffusion tensor MRI[J]. NeuroImage, 2022, 253(1): 119033. |
| [33] | FADNAVIS S, BATSON J, GARYFALLIDIS E. Patch2Self: Denoising diffusion MRI with self-supervised learning[C]// Advances in Neural Information Processing Systems, Virtual. USA: Curran Associates, Inc., 2020: 16293-16303. |
| [34] | DU H B, YUAN N N, WANG L H. Node2Node: self-supervised cardiac diffusion tensor image denoising method[J]. Appl Sci, 2023, 13(19): 10829. |
| [35] | MA X R, CHENG J, FAN W X, et al. 3D anatomical structure-guided deep learning for accurate diffusion microstructure imaging[C]// 2025 IEEE 22nd International Symposium on Biomedical Imaging (ISBI), Houston, TX, USA. Piscataway: IEEE, 2025: 1-4. |
| [36] | NIU X L, LV J Q, YE Z T, et al. Multicontrast MR-guided diffusion model for ultra-low-dose brain PET denoising in temporal lobe epilepsy[J]. IEEE J Biomed Health, 2026, 30(3): 2316-2327. |
| [37] | NASEEM R, CHEIKH F A, BEGHDADI A, et al. Cross-modal guidance assisted hierarchical learning based siamese network for MR image denoising[J]. Electronics, 2021, 10(22): 2855. |
| [38] | ZHANG K, ZUO W M, CHEN Y J, et al. Beyond a gaussian denoiser: residual learning of deep CNN for image denoising[J]. IEEE T Image Process, 2017, 26(7): 3142-3155. |
| [39] | WANG H, ZHENG R C, DAI F, et al. High-field MR diffusion-weighted image denoising using a joint denoising convolutional neural network[J]. J Magn Reson Imaging, 2019, 50(6): 1937-1947. |
| [40] | ZHANG L P, XIAO Z Z, ZHOU C, et al. Spatial adaptive and transformer fusion network (STFNet) for low-count PET blind denoising with MRI[J]. Med Phys, 2022, 49(1): 343-356. |
| [41] | XIANG T G, YURT M, SYED A B, et al. DDM2: self-supervised diffusion MRI denoising with generative diffusion models[C]// Proceedings of the 11th International Conference on Learning Representations (ICLR). Kigali, Rwanda: ICLR, 2023: 1-19. |
| [42] | LI Z, FAN Q, BILGIC B, et al. Diffusion MRI data analysis assisted by deep learning synthesized anatomical images (DeepAnat)[J]. Med Image Anal, 2023, 86(1): 102744. |
| [43] | PFAFF L, HOSSBACH J, PREUHS E, et al. Self-supervised MRI denoising: leveraging Stein's unbiased risk estimator and spatially resolved noise maps[J]. Sci Rep, 2023, 13(1): 22629. |
| [44] | YUAN N, WANG L, YE C, et al. Self-supervised structural similarity-based convolutional neural network for cardiac diffusion tensor image denoising[J]. Med Phys, 2023, 50(10): 6137-6150. |
| [45] | TU J C, SHI Y K, LAM F. Score-based self-supervised MRI denoising[C]// Proceedings of the 13th International Conference on Learning Representations (ICLR). Singapore: ICLR, 2025: 1-20. |
| [46] | WU C, KONG Q, JIANG Z, et al. Self-supervised diffusion MRI denoising via iterative and stable refinement[C]// Proceedings of the 13th International Conference on Learning Representations (ICLR). Singapore: ICLR, 2025: 1-22. |
| [47] | MUCKLEY M J, ADES-ARON B, PAPAIOANNOU A, et al. Training a neural network for Gibbs and noise removal in diffusion MRI[J]. Magn Reson Med, 2020, 85: 413-428. |
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