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Studies of Antioxidation Activity of Natural Products with EPR Methods
LU Jing-Fen, GU Li-Nu-Er, LI Ting-Feng
Chinese Journal of Magnetic Resonance, 2010, 27(1): 22-31.
Many of EPR(electron paramagnetic resonance) experimental methods can be used in studies of antioxidation activities of natural products, such as spin trapping EPR, cryogenic EPR for modeled animals and spin labeling EPR et al. It is an elementary requirement for an antioxidant to scavenge oxygen free radicals in vitro , but evaluating method in vivo is more valuable when the antioxidant is applied to a biological system. Through the studies of more than 200 herbages and some TCM recipes, the EPR screening methods for natural products as antioxidants have been established and described in detail. With the above EPR methods, it is believed that antioxidation activities of natural products can be obtained at molecular, cell, and tissue levels, respectively.
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13 C NMR Study of Linear-Hyperbranched Block Polyethylene
XIAO An-Guo, WANG Li, LIU Qing-Quan, SHU Hao-Jie, GAO Jing-Min, DING Wen-Bing, ZHAO Yu-Lai-
Chinese Journal of Magnetic Resonance, 2010, 27(1): 32-38.
The linear-hyperbranched block polyethylene (LHBPE) is a new class of polymer with useful combinations of amorphous and crystalline segments. This LHBPE could be prepared via ethylene polymerization catalyzed by α-diimine nickel complex/ansa-ethylene bis-(1-η5 -indenyl)-zirconium dichloride/methylaluminoxane (MAO) in the presence of chain transfer agent. Herein, a 13 C NMR study of the LHBPEs is presented. Short branches such as methyl, ethyl, propyl, butyl and amyl were assigned and quantified.
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Applications of Electron Spin Resonance in Biology and Medicine
ZHAO Bao-Lu
Chinese Journal of Magnetic Resonance, 2010, 27(1): 51-67.
Electron spin resonance (ESR) is the most direct technique and an effective and unique way to detect free radicals in biological samples. This paper reviews the applications of ESR in biology and medicine. The topics reviewed include development of spin labeling and spin trapping, ESR imaging and applications of ESR in studies of cell membrane, protein structure, and diseases (i.e., heart diseases, Alzheimer's disease, Parkinson’s disease, stoke, radiation damage and plant diseases).
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Applications of Nuclear Magnetic Resonance Spectroscopy in Drug Discovery
ZHOU Qiu-Ju, XIANG Jun-Feng, TANG Ya-Lin
Chinese Journal of Magnetic Resonance, 2010, 27(1): 68-79.
Nuclear magnetic resonance (NMR) spectroscopy is often valued for its ability to shed light on molecular structure, but its greatest potential in drug discovery probably lies in the information it can reveal about molecular interactions at atomic level. The NMR parameters of the atoms in a compound, such as chemical shift, diffusion coefficient and relaxation time, are highly sensitive to the chemical environment surrounding them. Measuring these parameters therefore can provide information on whether a small molecule binds to a target protein or nucleic acid, and what are the interacting parts of the small molecule and the macromolecular target. The NMR approaches can be used to validate ligand binding and/or to identify potential ligands in the mixtures of compounds. In the last decade, the ability of NMR spectroscopy as a tool to monitor intermolecular interactions in drug discovery has been increasingly appreciated in both academia and industry. In this perspective, we highlight some major applications of NMR in drug discovery in this review article, with focus on hit screening.
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Succinimide-Linked Nitrone: Synthesis and ESR Studies
WANG Guang-Qing, DU Li-Bo, ZHANG Dong-Yan, XU Yuan-Chao, HE Zeng, TIAN Qiu, JIA Hong-Ying, LIU Yang,
Chinese Journal of Magnetic Resonance, 2010, 27(1): 80-88.
A novel linear nitrone spin-trap, DSC-PBN (N-(4-(((2,5-dioxopyrrolidin-1-yloxy)carbonyloxy)methyl)benzylidene)-2-methylpropan-2-N-oxide), was designed and synthesized. Its structure was characterized by UV, MS and 1 H NMR techniques. ESR results showed that the compound could be used to trap various free radicals efficiently, and the ESR spectra of the trapped radicals were readily recognizable. DSC-PBN could easily form a covalent link to the N-terminal peptides (or proteins) via succinimide intermediates, thus showing high potential for biological applications.
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Effects of Heavy Ion Radiation on Rat Frontal Cortex Studied by 1 H NMR Based Metabonomics Data Analysis
LI Yan-Li, WANG Hong-Bin, GUO Can-Xiong, WANG Mei, YAN Bao-Zhen, HU Gao-Fei, DENG Yu-Lin-
Chinese Journal of Magnetic Resonance, 2010, 27(1): 103-112.
Space radiation, especially heavy-ion radiation, can cause the damages to DNA, cell death and incidence of some types of cancer. We studied the effects of heavy-ion radiation on cerebral metabolism in rats. To simulate the biological effects of space heavy ions radiation on the central nervous system (CNS), rats heads were exposed to 12 C6+ particle beam. The 1 H NMR based metabonomics approach was used to analyze the changes in metabolic profiles of the frontal cortex of the rats exposed to radiation. The results revealed that heavy-ion radiation caused significant changes in the levels of some cerebral metabolites, including taurine, lactate, creatine, myo-inositol, phosphorylcholine and some key neurotransmitters (i.e., glutamate and 4-aminobutyric acid). The results of further differential proteomics analysis showed that there were significant changes in the neurotransmitter synthesis pathway and neurotransmitter receptor-mediated signaling pathways after heavy-ion radiation. The findings from this study provided useful information on the molecular mechanism of the effects of heavy-ion radiation on cerebral metabolism.
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An EPR Spectrum Simulation-Fourier Deconvolution Method for Distance Measurement in Proteins
GUO Lin-Chao, WANG Chang-Zhen, CONG Jian-Bo, XIAN Hong, WU Ke
Chinese Journal of Magnetic Resonance, 2010, 27(1): 113-120.
Measuring distances among the functional domains of a protein is essential for understanding the structurefunction relationship in the protein. Electron paramagnetic resonance (EPR) combined with site-directed spin labeling (SDSL) is an important approach for determining the distances among selected points in a protein. With this approach, Fourier deconvolution distance measurement (FDDM) was often used to calculate the distances. The FDDM method, however, may show poor performance under special experimental conditions, such that some crucial parameters need to be set up manually, resulting in increased susceptibility to subjective errors. To solve this problem, a new distance calculation method, spectrum simulation-Fourier deconvolution distance measurement (SS-FDDM), was developed in this study. The validity of the method was tested with an experimental model of frozen free radical solution. SS-FDDM was then compared to FDDM in terms of practicability, antinoise performance and susceptibility to field shifting. The results showed that, with SS-FDDM, calculation errors originated from spectrum center shift and high noise levels can be reduced substantially, thus giving more reliable results.
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Structural Origins of the Differential Antioxidative Activities between Baicalein and Baicalin
LIANG Ran, CHEN Chang-Hui, AI Xi-Cheng, ZHANG Jian-Ping
Chinese Journal of Magnetic Resonance, 2010, 27(1): 132-140.
Baicalein, a primary metabolite of baicalin, differs from its mother compound merely by the 7-substituent (i.e. it possesses a phenolic hydroxyl (7-OH) instead of a glucuronic acid). The present work is intended to compare, by means of steady-state optical absorption spectroscopy, cyclic voltammetry, ESR and quantum chemical calculation, their physicochemical properties, such as pKa, log10 partition coefficient, redox potential and dipole moment, as well as their capacities of scavenging ABTS·+ (TEAC) and autoxidation of baicalein. Experimental results showed that the 7-OH group of baicalein was rather acidic (pK a =5.4). In addition, baicalein showed a lower redox potential (0.32 V vs . NHE) and a 1.8-fold higher TEAC with reference to baicalin under physiological pH. Theoretical results showed that the difference in 7-substituent resulted in significantly different molecular structures, physicochemical properties and radical scavenging activities of the flavonoids in question, which are discussed in terms of their micro- and macro-molecular properties. It was concluded that the number of phenolic hydroxyls and the corresponding pKa values, as well as the molecular structures are all important for the antioxidative activity of flavonoids.